Merge branch 'dev_Jules' into 'master' (8a2b4dbf) · Commits · GeT-nextflow-NGL-Bi / wf-Illumina-nf · GitLab

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8a2b4dbf

Commit 8a2b4dbf authored 1 year ago by Jules Sabban

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Merge branch 'dev_Jules' into 'master'

multipool

See merge request !10

parents c456a0fd ea6c3920

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bin/DTM/data_prepare.pl 46 additions, 41 deletions

bin/DTM/data_prepare.pl
bin/demuxStatsFromXML.R 2 additions, 2 deletions

bin/demuxStatsFromXML.R
bin/parse_reports.sh 9 additions, 2 deletions

bin/parse_reports.sh
conf/base.config 33 additions, 14 deletions

conf/base.config
conf/dependencies_genobioinfo.config 1 addition, 0 deletions

conf/dependencies_genobioinfo.config
conf/dependencies_genologin.config 1 addition, 0 deletions

conf/dependencies_genologin.config
conf/prod.config 13 additions, 0 deletions

conf/prod.config
conf/report.config 1 addition, 1 deletion

conf/report.config
conf/test.config 12 additions, 0 deletions

conf/test.config
docs/usage.md 11 additions, 1 deletion

docs/usage.md
modules/local/module_DTM.nf 2 additions, 1 deletion

modules/local/module_DTM.nf
modules/local/module_NGL-Bi.nf 2 additions, 3 deletions

modules/local/module_NGL-Bi.nf
nextflow.config 13 additions, 10 deletions

nextflow.config
sub-workflows/local/begin_nglbi.nf 1 addition, 1 deletion

sub-workflows/local/begin_nglbi.nf
sub-workflows/local/dna_qc.nf 3 additions, 0 deletions

sub-workflows/local/dna_qc.nf
workflow/illumina_qc.nf 12 additions, 7 deletions

workflow/illumina_qc.nf

with 162 additions and 83 deletions

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